Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.78□□□□□ -0.52
H2afb3S4R1G7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb3S4R1G7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Gm24694-201ENSMUST00000180054 110 ntBASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Gm27663-201ENSMUST00000184839 110 ntBASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Gm42550-201ENSMUST00000201553 960 ntBASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
H2afb3S4R1G7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Gm15920-201ENSMUST00000118998 402 ntBASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Gm12151-201ENSMUST00000121374 290 ntBASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.76□□□□□ -0.53
H2afb3S4R1G7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.76□□□□□ -0.53
H2afb3S4R1G7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms