Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Gm21769-201ENSMUST00000211922 111 ntBASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Gm8227-201ENSMUST00000223306 571 ntBASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn8aQ9WTU3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Gm11222-201ENSMUST00000119005 738 ntBASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Gm38266-201ENSMUST00000194931 421 ntBASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Gm7783-201ENSMUST00000204795 781 ntBASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn8aQ9WTU3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn8aQ9WTU3 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.02□□□□□ -0.33
Scn8aQ9WTU3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scn8aQ9WTU3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn8aQ9WTU3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scn8aQ9WTU3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn8aQ9WTU3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn8aQ9WTU3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn8aQ9WTU3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn8aQ9WTU3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Morn2-202ENSMUST00000227729 656 ntBASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Gm13875-201ENSMUST00000120162 282 ntBASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Gm43822-201ENSMUST00000200285 476 ntBASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Gm5904-201ENSMUST00000210286 865 ntBASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.01□□□□□ -0.33
Scn8aQ9WTU3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms