Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf3Q9QXK7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf3Q9QXK7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf3Q9QXK7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Gm8062-201ENSMUST00000139696 444 ntBASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Gm5370-201ENSMUST00000187187 574 ntBASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf3Q9QXK7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Gm44401-201ENSMUST00000204462 2375 ntBASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Gm25261-201ENSMUST00000157416 134 ntBASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Gm17208-201ENSMUST00000168388 535 ntBASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Gm25927-201ENSMUST00000175058 117 ntBASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Gm8798-201ENSMUST00000211877 1661 ntBASIC14□□□□□ -0.17
Cpsf3Q9QXK7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14□□□□□ -0.17
Cpsf3Q9QXK7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cpsf3Q9QXK7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf3Q9QXK7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms