Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Mir7654-201ENSMUST00000185082 70 ntBASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Gm29608-201ENSMUST00000190444 463 ntBASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Gm18307-201ENSMUST00000206864 949 ntBASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sec61a2Q9JLR1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.77□□□□□ -0.52
Sec61a2Q9JLR1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Gm13689-201ENSMUST00000119360 685 ntBASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a2Q9JLR1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a2Q9JLR1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.76□□□□□ -0.53
Sec61a2Q9JLR1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
Sec61a2Q9JLR1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61a2Q9JLR1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms