Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.77□□□□□ -0.37
Rrp8Q9DB85 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.77□□□□□ -0.37
Rrp8Q9DB85 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.76□□□□□ -0.37
Rrp8Q9DB85 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Nsd1-205ENSMUST00000224693 852 ntBASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp8Q9DB85 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Gm15276-201ENSMUST00000145953 498 ntBASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Gm24990-201ENSMUST00000157406 323 ntBASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Gm2546-201ENSMUST00000182630 991 ntBASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Gm13097-201ENSMUST00000210722 397 ntBASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp8Q9DB85 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms