Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2aQ9DB34 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chmp2aQ9DB34 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2aQ9DB34 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2aQ9DB34 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2aQ9DB34 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Chmp2aQ9DB34 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2aQ9DB34 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Gm12203-201ENSMUST00000118235 598 ntBASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Gm13369-201ENSMUST00000119442 987 ntBASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Gm15824-201ENSMUST00000119516 955 ntBASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Gm12209-201ENSMUST00000120089 596 ntBASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Gm44069-201ENSMUST00000204898 506 ntBASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp2aQ9DB34 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Mir874-201ENSMUST00000104769 76 ntBASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Gm7561-201ENSMUST00000211203 886 ntBASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp2aQ9DB34 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2aQ9DB34 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Chmp2aQ9DB34 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2aQ9DB34 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.6□□□□□ -0.23
Chmp2aQ9DB34 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2aQ9DB34 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2aQ9DB34 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2aQ9DB34 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.6□□□□□ -0.23
Chmp2aQ9DB34 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms