Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Itm2b-204ENSMUST00000228637 783 ntBASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Gm43339-201ENSMUST00000200032 1606 ntBASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Gm37600-201ENSMUST00000193764 3292 ntBASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf3c6Q9D8P7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Lrtm1-203ENSMUST00000224760 3060 ntBASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf3c6Q9D8P7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms