Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Gm11745-201ENSMUST00000121669 448 ntBASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim42Q9D2H5 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.08□□□□□ -0.31
Trim42Q9D2H5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim42Q9D2H5 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim42Q9D2H5 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim42Q9D2H5 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.08□□□□□ -0.31
Trim42Q9D2H5 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim42Q9D2H5 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim42Q9D2H5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Gm6912-201ENSMUST00000117218 544 ntBASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Gm14494-201ENSMUST00000118786 435 ntBASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim42Q9D2H5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Gm45532-201ENSMUST00000210342 3620 ntBASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Gm15653-201ENSMUST00000119247 907 ntBASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Gm21156-201ENSMUST00000189693 869 ntBASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Gm19931-201ENSMUST00000198920 368 ntBASIC13.07□□□□□ -0.32
Trim42Q9D2H5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim42Q9D2H5 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms