Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt2Q9CZN7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Gm27701-201ENSMUST00000184498 110 ntBASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Gm38223-201ENSMUST00000194484 695 ntBASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Shmt2Q9CZN7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Paupar-201ENSMUST00000194826 3482 ntBASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Gm11918-201ENSMUST00000121660 179 ntBASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Gm38144-201ENSMUST00000192790 465 ntBASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shmt2Q9CZN7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shmt2Q9CZN7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms