Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.34■□□□□ 0.05
Smc3Q9CW03 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.34■□□□□ 0.05
Smc3Q9CW03 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.34■□□□□ 0.05
Smc3Q9CW03 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.34■□□□□ 0.05
Smc3Q9CW03 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.34■□□□□ 0.05
Smc3Q9CW03 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smc3Q9CW03 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smc3Q9CW03 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Smc3Q9CW03 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.33■□□□□ 0.05
Smc3Q9CW03 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Smc3Q9CW03 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Smc3Q9CW03 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.33■□□□□ 0.05
Smc3Q9CW03 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc3Q9CW03 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc3Q9CW03 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smc3Q9CW03 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.33■□□□□ 0.04
Smc3Q9CW03 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smc3Q9CW03 Gm13689-201ENSMUST00000119360 685 ntBASIC15.33■□□□□ 0.04
Smc3Q9CW03 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.33■□□□□ 0.04
Smc3Q9CW03 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Smc3Q9CW03 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.33■□□□□ 0.04
Smc3Q9CW03 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.33■□□□□ 0.04
Smc3Q9CW03 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.33■□□□□ 0.04
Smc3Q9CW03 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc3Q9CW03 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc3Q9CW03 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.33■□□□□ 0.04
Smc3Q9CW03 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc3Q9CW03 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smc3Q9CW03 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.33■□□□□ 0.04
Smc3Q9CW03 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smc3Q9CW03 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.32■□□□□ 0.04
Smc3Q9CW03 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.32■□□□□ 0.04
Smc3Q9CW03 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.32■□□□□ 0.04
Smc3Q9CW03 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smc3Q9CW03 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms