Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm18377-201ENSMUST00000215141 607 ntBASIC12.38□□□□□ -0.43
Otud1Q9CUB6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Otud1Q9CUB6 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.37□□□□□ -0.43
Otud1Q9CUB6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Gm26185-201ENSMUST00000157692 266 ntBASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Gm6222-202ENSMUST00000182143 629 ntBASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Gm42693-201ENSMUST00000196779 631 ntBASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Gm45880-201ENSMUST00000213041 853 ntBASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Gm10478-201ENSMUST00000084451 396 ntBASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.37□□□□□ -0.43
Otud1Q9CUB6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Otud1Q9CUB6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Gm2231-201ENSMUST00000125661 612 ntBASIC12.36□□□□□ -0.43
Otud1Q9CUB6 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Gm26927-201ENSMUST00000182385 965 ntBASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Mir7221-201ENSMUST00000184009 72 ntBASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Otud1Q9CUB6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms