Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sec61bQ9CQS8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sec61bQ9CQS8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm45832-201ENSMUST00000212762 1443 ntBASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm16202-201ENSMUST00000117532 544 ntBASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm2231-201ENSMUST00000125661 612 ntBASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm16379-201ENSMUST00000161469 348 ntBASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm29013-201ENSMUST00000187431 237 ntBASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm28745-201ENSMUST00000190069 305 ntBASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm8762-201ENSMUST00000193486 339 ntBASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gm37008-201ENSMUST00000195712 319 ntBASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sec61bQ9CQS8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
Sec61bQ9CQS8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sec61bQ9CQS8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sec61bQ9CQS8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sec61bQ9CQS8 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sec61bQ9CQS8 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.12□□□□□ -1.27
Sec61bQ9CQS8 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms