Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Mir692-1-201ENSMUST00000102263 109 ntBASIC13□□□□□ -0.33
Trim33Q99PP7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim33Q99PP7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim33Q99PP7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13□□□□□ -0.33
Trim33Q99PP7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13□□□□□ -0.33
Trim33Q99PP7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13□□□□□ -0.33
Trim33Q99PP7 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13□□□□□ -0.33
Trim33Q99PP7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13□□□□□ -0.33
Trim33Q99PP7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 CT009754.4-201ENSMUST00000221430 565 ntBASIC13□□□□□ -0.33
Trim33Q99PP7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim33Q99PP7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13□□□□□ -0.33
Trim33Q99PP7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim33Q99PP7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim33Q99PP7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13□□□□□ -0.33
Trim33Q99PP7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim33Q99PP7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.99□□□□□ -0.33
Trim33Q99PP7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.99□□□□□ -0.33
Trim33Q99PP7 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.99□□□□□ -0.33
Trim33Q99PP7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.99□□□□□ -0.33
Trim33Q99PP7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Gm18473-201ENSMUST00000220543 868 ntBASIC12.99□□□□□ -0.33
Trim33Q99PP7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.99□□□□□ -0.33
Trim33Q99PP7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim33Q99PP7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.98□□□□□ -0.33
Trim33Q99PP7 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Gm5687-201ENSMUST00000118252 640 ntBASIC12.98□□□□□ -0.33
Trim33Q99PP7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Gm43930-201ENSMUST00000203868 845 ntBASIC12.98□□□□□ -0.33
Trim33Q99PP7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Itm2b-204ENSMUST00000228637 783 ntBASIC12.98□□□□□ -0.33
Trim33Q99PP7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms