Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rtn4rQ99PI8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rtn4rQ99PI8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rtn4rQ99PI8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rtn4rQ99PI8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rtn4rQ99PI8 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.53□□□□□ -0.56
Rtn4rQ99PI8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.53□□□□□ -0.56
Rtn4rQ99PI8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.53□□□□□ -0.56
Rtn4rQ99PI8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rtn4rQ99PI8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Rtn4rQ99PI8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rtn4rQ99PI8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtn4rQ99PI8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtn4rQ99PI8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rtn4rQ99PI8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtn4rQ99PI8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtn4rQ99PI8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.52□□□□□ -0.56
Rtn4rQ99PI8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtn4rQ99PI8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtn4rQ99PI8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtn4rQ99PI8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rtn4rQ99PI8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rtn4rQ99PI8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Gm16202-201ENSMUST00000117532 544 ntBASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Gm11978-201ENSMUST00000122315 466 ntBASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Gm37497-201ENSMUST00000195830 798 ntBASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Gm16372-201ENSMUST00000073088 450 ntBASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rtn4rQ99PI8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Mir1982-201ENSMUST00000157368 74 ntBASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Mir7221-201ENSMUST00000184009 72 ntBASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Gm37922-201ENSMUST00000195596 455 ntBASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rtn4rQ99PI8 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms