Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Gm42518-201ENSMUST00000196277 938 ntBASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Gm18204-201ENSMUST00000209835 793 ntBASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdh23Q99PF4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Gm5100-201ENSMUST00000195631 589 ntBASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.92□□□□□ -0.34
Cdh23Q99PF4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh23Q99PF4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Gm23771-201ENSMUST00000178702 110 ntBASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh23Q99PF4 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Gm25881-201ENSMUST00000157783 103 ntBASIC12.9□□□□□ -0.34
Cdh23Q99PF4 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Gm270-201ENSMUST00000223010 976 ntBASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Gm11246-201ENSMUST00000120880 345 ntBASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Gm6485-201ENSMUST00000160676 439 ntBASIC12.9□□□□□ -0.34
Cdh23Q99PF4 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms