Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf111Q99ML9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Gm37917-201ENSMUST00000194711 392 ntBASIC12.66□□□□□ -0.38
Rnf111Q99ML9 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Gm17330-201ENSMUST00000221047 165 ntBASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Gm5161-201ENSMUST00000075243 853 ntBASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf111Q99ML9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Gm24447-201ENSMUST00000083977 338 ntBASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.65□□□□□ -0.38
Rnf111Q99ML9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms