Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tlr3Q99MB1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Gm8062-201ENSMUST00000139696 444 ntBASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Gm10478-201ENSMUST00000084451 396 ntBASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.01□□□□□ -0.17
Tlr3Q99MB1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14□□□□□ -0.17
Tlr3Q99MB1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tlr3Q99MB1 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Gm45643-201ENSMUST00000211364 1484 ntBASIC14□□□□□ -0.17
Tlr3Q99MB1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tlr3Q99MB1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tlr3Q99MB1 Gm8213-201ENSMUST00000118191 441 ntBASIC14□□□□□ -0.17
Tlr3Q99MB1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Proscos-202ENSMUST00000178990 666 ntBASIC14□□□□□ -0.17
Tlr3Q99MB1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14□□□□□ -0.17
Tlr3Q99MB1 Gm9728-201ENSMUST00000200197 1055 ntBASIC14□□□□□ -0.17
Tlr3Q99MB1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Gm6458-201ENSMUST00000211573 635 ntBASIC14□□□□□ -0.17
Tlr3Q99MB1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tlr3Q99MB1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tlr3Q99MB1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14□□□□□ -0.17
Tlr3Q99MB1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14□□□□□ -0.17
Tlr3Q99MB1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tlr3Q99MB1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14□□□□□ -0.17
Tlr3Q99MB1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Tlr3Q99MB1 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.99□□□□□ -0.17
Tlr3Q99MB1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tlr3Q99MB1 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.99□□□□□ -0.17
Tlr3Q99MB1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tlr3Q99MB1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.99□□□□□ -0.17
Tlr3Q99MB1 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tlr3Q99MB1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Tlr3Q99MB1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.99□□□□□ -0.17
Tlr3Q99MB1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms