Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Gm15547-201ENSMUST00000122152 333 ntBASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Gm20426-201ENSMUST00000173657 440 ntBASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx6-1Q99MA9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx6-1Q99MA9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Mir1943-201ENSMUST00000158276 73 ntBASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms