Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.46□□□□□ -0.57
Scrt1Q99M85 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.46□□□□□ -0.57
Scrt1Q99M85 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Gm13297-201ENSMUST00000120205 934 ntBASIC11.46□□□□□ -0.57
Scrt1Q99M85 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.46□□□□□ -0.57
Scrt1Q99M85 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Rps4l-202ENSMUST00000204242 789 ntBASIC11.46□□□□□ -0.57
Scrt1Q99M85 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scrt1Q99M85 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scrt1Q99M85 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Scrt1Q99M85 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scrt1Q99M85 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Scrt1Q99M85 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Scrt1Q99M85 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Scrt1Q99M85 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scrt1Q99M85 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scrt1Q99M85 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scrt1Q99M85 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.45□□□□□ -0.58
Scrt1Q99M85 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.45□□□□□ -0.58
Scrt1Q99M85 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.45□□□□□ -0.58
Scrt1Q99M85 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.45□□□□□ -0.58
Scrt1Q99M85 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.45□□□□□ -0.58
Scrt1Q99M85 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.45□□□□□ -0.58
Scrt1Q99M85 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.45□□□□□ -0.58
Scrt1Q99M85 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scrt1Q99M85 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.44□□□□□ -0.58
Scrt1Q99M85 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.44□□□□□ -0.58
Scrt1Q99M85 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Gm11618-201ENSMUST00000117946 267 ntBASIC11.44□□□□□ -0.58
Scrt1Q99M85 Gm4986-201ENSMUST00000119731 549 ntBASIC11.44□□□□□ -0.58
Scrt1Q99M85 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Gm22902-201ENSMUST00000158488 302 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms