Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Mir7221-201ENSMUST00000184009 72 ntBASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Gm43133-201ENSMUST00000197472 463 ntBASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.9□□□□□ -0.34
Clcc1Q99LI2 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clcc1Q99LI2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Clcc1Q99LI2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Clcc1Q99LI2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Clcc1Q99LI2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Gm2231-201ENSMUST00000125661 612 ntBASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Gm26185-201ENSMUST00000157692 266 ntBASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Gm43118-201ENSMUST00000199149 775 ntBASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clcc1Q99LI2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Gm43822-201ENSMUST00000200285 476 ntBASIC12.88□□□□□ -0.35
Clcc1Q99LI2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcc1Q99LI2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms