Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thumpd1Q99J36 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Gm12485-201ENSMUST00000119641 291 ntBASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Gm27525-201ENSMUST00000184465 107 ntBASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Gm5312-201ENSMUST00000203728 547 ntBASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thumpd1Q99J36 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.62□□□□□ -0.55
Thumpd1Q99J36 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.62□□□□□ -0.55
Thumpd1Q99J36 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Thumpd1Q99J36 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thumpd1Q99J36 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thumpd1Q99J36 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thumpd1Q99J36 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Thumpd1Q99J36 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thumpd1Q99J36 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Thumpd1Q99J36 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thumpd1Q99J36 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Thumpd1Q99J36 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms