Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Clip1Q922J3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clip1Q922J3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Clip1Q922J3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Clip1Q922J3 Gm37201-201ENSMUST00000191845 523 ntBASIC20.3■□□□□ 0.84
Clip1Q922J3 Gm18212-201ENSMUST00000211678 889 ntBASIC20.3■□□□□ 0.84
Clip1Q922J3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clip1Q922J3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clip1Q922J3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clip1Q922J3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clip1Q922J3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clip1Q922J3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clip1Q922J3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clip1Q922J3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Clip1Q922J3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC20.3■□□□□ 0.84
Clip1Q922J3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clip1Q922J3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC20.29■□□□□ 0.84
Clip1Q922J3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clip1Q922J3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Clip1Q922J3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Clip1Q922J3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clip1Q922J3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clip1Q922J3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clip1Q922J3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clip1Q922J3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Clip1Q922J3 Gm3786-201ENSMUST00000202659 378 ntBASIC20.29■□□□□ 0.84
Clip1Q922J3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC20.29■□□□□ 0.84
Clip1Q922J3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clip1Q922J3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clip1Q922J3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clip1Q922J3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clip1Q922J3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clip1Q922J3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC20.29■□□□□ 0.84
Clip1Q922J3 Gm38391-201ENSMUST00000191720 4069 ntBASIC20.29■□□□□ 0.84
Clip1Q922J3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC20.29■□□□□ 0.84
Clip1Q922J3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clip1Q922J3 Gm44443-201ENSMUST00000204396 5633 ntBASIC20.28■□□□□ 0.84
Clip1Q922J3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC20.28■□□□□ 0.84
Clip1Q922J3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Clip1Q922J3 Gm7857-201ENSMUST00000117957 358 ntBASIC20.28■□□□□ 0.84
Clip1Q922J3 Gm4909-201ENSMUST00000118749 794 ntBASIC20.28■□□□□ 0.84
Clip1Q922J3 Gm14208-201ENSMUST00000119645 678 ntBASIC20.28■□□□□ 0.84
Clip1Q922J3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC20.28■□□□□ 0.84
Clip1Q922J3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC20.28■□□□□ 0.84
Clip1Q922J3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC20.28■□□□□ 0.84
Clip1Q922J3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC20.28■□□□□ 0.84
Clip1Q922J3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clip1Q922J3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Clip1Q922J3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Clip1Q922J3 Gm4864-201ENSMUST00000219894 1461 ntBASIC20.27■□□□□ 0.84
Clip1Q922J3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clip1Q922J3 Gm44094-201ENSMUST00000204703 2030 ntBASIC20.27■□□□□ 0.84
Clip1Q922J3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Clip1Q922J3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clip1Q922J3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clip1Q922J3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clip1Q922J3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clip1Q922J3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clip1Q922J3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clip1Q922J3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clip1Q922J3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clip1Q922J3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clip1Q922J3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Clip1Q922J3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Clip1Q922J3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC20.26■□□□□ 0.83
Clip1Q922J3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC20.26■□□□□ 0.83
Clip1Q922J3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC20.26■□□□□ 0.83
Clip1Q922J3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC20.26■□□□□ 0.83
Clip1Q922J3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC20.26■□□□□ 0.83
Clip1Q922J3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC20.26■□□□□ 0.83
Clip1Q922J3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Clip1Q922J3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clip1Q922J3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms