Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm12138-201ENSMUST00000122180 951 ntBASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Mir1894-201ENSMUST00000122802 81 ntBASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm6244-201ENSMUST00000178732 841 ntBASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm9794-201ENSMUST00000202370 423 ntBASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm17794-201ENSMUST00000220252 955 ntBASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm5356-201ENSMUST00000093326 615 ntBASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb1Q91Y08 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb1Q91Y08 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms