Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Mir7221-201ENSMUST00000184009 72 ntBASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 AC192088.1-201ENSMUST00000227561 301 ntBASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Gm38385-201ENSMUST00000194454 2351 ntBASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb4Q91XZ6 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Gm29608-201ENSMUST00000190444 463 ntBASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb4Q91XZ6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Gm42550-201ENSMUST00000201553 960 ntBASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Gm44855-201ENSMUST00000205725 362 ntBASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb4Q91XZ6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 123.7 ms