Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Tram1Q91V04 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.23□□□□□ -0.61
Tram1Q91V04 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.23□□□□□ -0.61
Tram1Q91V04 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.23□□□□□ -0.61
Tram1Q91V04 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.23□□□□□ -0.61
Tram1Q91V04 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.23□□□□□ -0.61
Tram1Q91V04 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tram1Q91V04 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Tram1Q91V04 Gm24543-201ENSMUST00000103867 82 ntBASIC11.22□□□□□ -0.61
Tram1Q91V04 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Tram1Q91V04 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.22□□□□□ -0.61
Tram1Q91V04 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.22□□□□□ -0.61
Tram1Q91V04 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Tram1Q91V04 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.22□□□□□ -0.61
Tram1Q91V04 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.22□□□□□ -0.61
Tram1Q91V04 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Tram1Q91V04 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Tram1Q91V04 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.22□□□□□ -0.61
Tram1Q91V04 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.22□□□□□ -0.61
Tram1Q91V04 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.61
Tram1Q91V04 Gm9229-201ENSMUST00000222777 126 ntBASIC11.22□□□□□ -0.61
Tram1Q91V04 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.22□□□□□ -0.61
Tram1Q91V04 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.22□□□□□ -0.61
Tram1Q91V04 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Tram1Q91V04 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Tram1Q91V04 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Tram1Q91V04 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Tram1Q91V04 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Tram1Q91V04 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Tram1Q91V04 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tram1Q91V04 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Tram1Q91V04 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms