Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Defa-ps4-201ENSMUST00000118021 183 ntBASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Gm10766-202ENSMUST00000194123 606 ntBASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Gm43575-201ENSMUST00000196420 516 ntBASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa1Q8VEE4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Gm12106-201ENSMUST00000116006 1200 ntBASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Gm15393-201ENSMUST00000120499 219 ntBASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Gm13899-201ENSMUST00000121519 1255 ntBASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Gm44335-201ENSMUST00000196879 141 ntBASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Gm44297-201ENSMUST00000198304 141 ntBASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Gm44346-201ENSMUST00000198851 141 ntBASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Gm43125-201ENSMUST00000201724 730 ntBASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.16□□□□□ -0.3
Rpa1Q8VEE4 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Gm26308-201ENSMUST00000157768 69 ntBASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Gm19931-201ENSMUST00000198920 368 ntBASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa1Q8VEE4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms