Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slf1Q8R3P9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Slf1Q8R3P9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slf1Q8R3P9 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slf1Q8R3P9 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slf1Q8R3P9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slf1Q8R3P9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slf1Q8R3P9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slf1Q8R3P9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slf1Q8R3P9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slf1Q8R3P9 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Mir874-201ENSMUST00000104769 76 ntBASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Gm25144-201ENSMUST00000179561 110 ntBASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Gm25352-201ENSMUST00000179815 110 ntBASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Gm27533-201ENSMUST00000183800 152 ntBASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.19□□□□□ -0.3
Slf1Q8R3P9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Shd-206ENSMUST00000225145 998 ntBASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slf1Q8R3P9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Gm15653-201ENSMUST00000119247 907 ntBASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slf1Q8R3P9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Slf1Q8R3P9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slf1Q8R3P9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slf1Q8R3P9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slf1Q8R3P9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slf1Q8R3P9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slf1Q8R3P9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slf1Q8R3P9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slf1Q8R3P9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.17□□□□□ -0.3
Slf1Q8R3P9 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.17□□□□□ -0.3
Slf1Q8R3P9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slf1Q8R3P9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slf1Q8R3P9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.17□□□□□ -0.3
Slf1Q8R3P9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms