Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vopp1Q8R1C3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vopp1Q8R1C3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Vopp1Q8R1C3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Gm18304-201ENSMUST00000189162 546 ntBASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vopp1Q8R1C3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Gm23200-201ENSMUST00000104379 132 ntBASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Gm14130-201ENSMUST00000118417 987 ntBASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Gm5070-201ENSMUST00000177599 862 ntBASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Gzmn-202ENSMUST00000225535 989 ntBASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Gm10076-201ENSMUST00000073238 384 ntBASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vopp1Q8R1C3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Gm12217-201ENSMUST00000118858 696 ntBASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Gm14760-201ENSMUST00000121831 999 ntBASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Rps4l-202ENSMUST00000204242 789 ntBASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vopp1Q8R1C3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms