Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Gm18049-201ENSMUST00000208909 581 ntBASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Gm16476-201ENSMUST00000221544 139 ntBASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf4Q8K4J2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Gm18766-201ENSMUST00000189811 808 ntBASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf4Q8K4J2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Gm24420-201ENSMUST00000176676 59 ntBASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Gm29541-201ENSMUST00000191351 678 ntBASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms