Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Gm19324-201ENSMUST00000213229 1169 ntBASIC15.07■□□□□ 0
Rtn1Q8K0T0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rtn1Q8K0T0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rtn1Q8K0T0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.06■□□□□ 0
Rtn1Q8K0T0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Gm4984-201ENSMUST00000115987 360 ntBASIC15.06■□□□□ 0
Rtn1Q8K0T0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.06■□□□□ 0
Rtn1Q8K0T0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Gm17150-201ENSMUST00000165577 381 ntBASIC15.06■□□□□ 0
Rtn1Q8K0T0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Gm36991-201ENSMUST00000191800 648 ntBASIC15.06■□□□□ 0
Rtn1Q8K0T0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.06■□□□□ 0
Rtn1Q8K0T0 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.06■□□□□ 0
Rtn1Q8K0T0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.06■□□□□ 0
Rtn1Q8K0T0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rtn1Q8K0T0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Rtn1Q8K0T0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Rtn1Q8K0T0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Rtn1Q8K0T0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Rtn1Q8K0T0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.05■□□□□ 0
Rtn1Q8K0T0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rtn1Q8K0T0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Rtn1Q8K0T0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rtn1Q8K0T0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rtn1Q8K0T0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rtn1Q8K0T0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rtn1Q8K0T0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms