Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.3□□□□□ -0.44
Ska3Q8C263 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.3□□□□□ -0.44
Ska3Q8C263 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska3Q8C263 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska3Q8C263 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska3Q8C263 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska3Q8C263 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ska3Q8C263 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ska3Q8C263 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ska3Q8C263 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska3Q8C263 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska3Q8C263 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ska3Q8C263 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.29□□□□□ -0.44
Ska3Q8C263 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ska3Q8C263 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Ska3Q8C263 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Pck2-205ENSMUST00000226352 2784 ntBASIC12.29□□□□□ -0.44
Ska3Q8C263 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ska3Q8C263 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Gm11618-201ENSMUST00000117946 267 ntBASIC12.29□□□□□ -0.44
Ska3Q8C263 Gm11803-201ENSMUST00000119966 444 ntBASIC12.29□□□□□ -0.44
Ska3Q8C263 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.29□□□□□ -0.44
Ska3Q8C263 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.29□□□□□ -0.44
Ska3Q8C263 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Ska3Q8C263 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ska3Q8C263 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.29□□□□□ -0.44
Ska3Q8C263 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.29□□□□□ -0.44
Ska3Q8C263 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ska3Q8C263 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska3Q8C263 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.29□□□□□ -0.44
Ska3Q8C263 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ska3Q8C263 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.28□□□□□ -0.44
Ska3Q8C263 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ska3Q8C263 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ska3Q8C263 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ska3Q8C263 Gm27847-201ENSMUST00000183711 107 ntBASIC12.28□□□□□ -0.44
Ska3Q8C263 Gm27375-201ENSMUST00000183799 107 ntBASIC12.28□□□□□ -0.44
Ska3Q8C263 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.28□□□□□ -0.44
Ska3Q8C263 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.28□□□□□ -0.44
Ska3Q8C263 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.28□□□□□ -0.44
Ska3Q8C263 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ska3Q8C263 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ska3Q8C263 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Ska3Q8C263 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska3Q8C263 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.28□□□□□ -0.44
Ska3Q8C263 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Ska3Q8C263 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ska3Q8C263 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ska3Q8C263 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ska3Q8C263 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms