Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Gm5035-201ENSMUST00000215581 927 ntBASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp43Q8BUM9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Usp43Q8BUM9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp43Q8BUM9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp43Q8BUM9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.21□□□□□ -0.3
Usp43Q8BUM9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Usp43Q8BUM9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Gm12203-201ENSMUST00000118235 598 ntBASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Gm12209-201ENSMUST00000120089 596 ntBASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Gm37497-201ENSMUST00000195830 798 ntBASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.2□□□□□ -0.3
Usp43Q8BUM9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Gm27486-201ENSMUST00000184923 80 ntBASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.19□□□□□ -0.3
Usp43Q8BUM9 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms