Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Gm25927-201ENSMUST00000175058 117 ntBASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Gm22121-201ENSMUST00000175148 54 ntBASIC13.34□□□□□ -0.27
Nup54Q8BTS4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Gm5370-201ENSMUST00000187187 574 ntBASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.34□□□□□ -0.27
Nup54Q8BTS4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.34□□□□□ -0.27
Nup54Q8BTS4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.34□□□□□ -0.27
Nup54Q8BTS4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.34□□□□□ -0.27
Nup54Q8BTS4 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nup54Q8BTS4 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nup54Q8BTS4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Nup54Q8BTS4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nup54Q8BTS4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Gm25261-201ENSMUST00000157416 134 ntBASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.33□□□□□ -0.28
Nup54Q8BTS4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nup54Q8BTS4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 133 ms