Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne3Q8BT60 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.62□□□□□ -0.39
Cpne3Q8BT60 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Gm20949-201ENSMUST00000206478 952 ntBASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne3Q8BT60 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Paupar-201ENSMUST00000194826 3482 ntBASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Gm22189-201ENSMUST00000103822 86 ntBASIC12.61□□□□□ -0.39
Cpne3Q8BT60 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Gm5354-201ENSMUST00000182417 973 ntBASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne3Q8BT60 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.6□□□□□ -0.39
Cpne3Q8BT60 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms