Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.5□□□□□ -0.41
SynbQ8BI41 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
SynbQ8BI41 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.5□□□□□ -0.41
SynbQ8BI41 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SynbQ8BI41 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.5□□□□□ -0.41
SynbQ8BI41 Gm1335-201ENSMUST00000121653 386 ntBASIC12.5□□□□□ -0.41
SynbQ8BI41 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Gm27682-201ENSMUST00000183930 110 ntBASIC12.5□□□□□ -0.41
SynbQ8BI41 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.5□□□□□ -0.41
SynbQ8BI41 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SynbQ8BI41 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SynbQ8BI41 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.5□□□□□ -0.41
SynbQ8BI41 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.5□□□□□ -0.41
SynbQ8BI41 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.5□□□□□ -0.41
SynbQ8BI41 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynbQ8BI41 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SynbQ8BI41 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SynbQ8BI41 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.49□□□□□ -0.41
SynbQ8BI41 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.49□□□□□ -0.41
SynbQ8BI41 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.49□□□□□ -0.41
SynbQ8BI41 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SynbQ8BI41 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.49□□□□□ -0.41
SynbQ8BI41 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.49□□□□□ -0.41
SynbQ8BI41 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.49□□□□□ -0.41
SynbQ8BI41 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.49□□□□□ -0.41
SynbQ8BI41 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.49□□□□□ -0.41
SynbQ8BI41 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
SynbQ8BI41 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynbQ8BI41 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.48□□□□□ -0.41
SynbQ8BI41 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.41
SynbQ8BI41 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SynbQ8BI41 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Gm38144-201ENSMUST00000192790 465 ntBASIC12.48□□□□□ -0.41
SynbQ8BI41 Gm43822-201ENSMUST00000200285 476 ntBASIC12.48□□□□□ -0.41
SynbQ8BI41 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Gm17330-201ENSMUST00000221047 165 ntBASIC12.48□□□□□ -0.41
SynbQ8BI41 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Gm9823-201ENSMUST00000051212 327 ntBASIC12.48□□□□□ -0.41
SynbQ8BI41 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SynbQ8BI41 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SynbQ8BI41 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.48□□□□□ -0.41
SynbQ8BI41 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SynbQ8BI41 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms