Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.62□□□□□ -0.39
Rnf38Q8BI21 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Gm6447-201ENSMUST00000118905 835 ntBASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Gm15321-201ENSMUST00000121290 288 ntBASIC12.62□□□□□ -0.39
Rnf38Q8BI21 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.62□□□□□ -0.39
Rnf38Q8BI21 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Gm9797-201ENSMUST00000052902 613 ntBASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf38Q8BI21 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Gm38144-201ENSMUST00000192790 465 ntBASIC12.61□□□□□ -0.39
Rnf38Q8BI21 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.61□□□□□ -0.39
Rnf38Q8BI21 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Matn2-203ENSMUST00000226766 3252 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms