Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Gm27847-201ENSMUST00000183711 107 ntBASIC12.9□□□□□ -0.34
Ubp1Q811S7 Gm27375-201ENSMUST00000183799 107 ntBASIC12.9□□□□□ -0.34
Ubp1Q811S7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.9□□□□□ -0.34
Ubp1Q811S7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Gm10012-201ENSMUST00000078252 192 ntBASIC12.9□□□□□ -0.34
Ubp1Q811S7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.9□□□□□ -0.35
Ubp1Q811S7 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.89□□□□□ -0.35
Ubp1Q811S7 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.89□□□□□ -0.35
Ubp1Q811S7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Gm4984-201ENSMUST00000115987 360 ntBASIC12.89□□□□□ -0.35
Ubp1Q811S7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.89□□□□□ -0.35
Ubp1Q811S7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Gm44069-201ENSMUST00000204898 506 ntBASIC12.89□□□□□ -0.35
Ubp1Q811S7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.89□□□□□ -0.35
Ubp1Q811S7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.89□□□□□ -0.35
Ubp1Q811S7 Gm6091-201ENSMUST00000098307 165 ntBASIC12.89□□□□□ -0.35
Ubp1Q811S7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ubp1Q811S7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.88□□□□□ -0.35
Ubp1Q811S7 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.88□□□□□ -0.35
Ubp1Q811S7 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.88□□□□□ -0.35
Ubp1Q811S7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Gm10156-201ENSMUST00000122364 462 ntBASIC12.88□□□□□ -0.35
Ubp1Q811S7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Gm22331-201ENSMUST00000158066 136 ntBASIC12.88□□□□□ -0.35
Ubp1Q811S7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Mir7221-201ENSMUST00000184009 72 ntBASIC12.88□□□□□ -0.35
Ubp1Q811S7 Gm18187-201ENSMUST00000196476 984 ntBASIC12.88□□□□□ -0.35
Ubp1Q811S7 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.88□□□□□ -0.35
Ubp1Q811S7 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms