Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim36Q80WG7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Gm11478-201ENSMUST00000117851 599 ntBASIC12.62□□□□□ -0.39
Trim36Q80WG7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Gm19220-201ENSMUST00000222682 803 ntBASIC12.62□□□□□ -0.39
Trim36Q80WG7 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.62□□□□□ -0.39
Trim36Q80WG7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Trim36Q80WG7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim36Q80WG7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.61□□□□□ -0.39
Trim36Q80WG7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.61□□□□□ -0.39
Trim36Q80WG7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Gm15770-201ENSMUST00000117498 584 ntBASIC12.61□□□□□ -0.39
Trim36Q80WG7 Gm11918-201ENSMUST00000121660 179 ntBASIC12.61□□□□□ -0.39
Trim36Q80WG7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Gm5354-201ENSMUST00000182417 973 ntBASIC12.61□□□□□ -0.39
Trim36Q80WG7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim36Q80WG7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.61□□□□□ -0.39
Trim36Q80WG7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim36Q80WG7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim36Q80WG7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim36Q80WG7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim36Q80WG7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trim36Q80WG7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms