Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Gm6013-201ENSMUST00000212264 699 ntBASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.41□□□□□ -0.1
Ccdc88cQ6VGS5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88cQ6VGS5 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc88cQ6VGS5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms