Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rif1Q6PR54 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Gm45310-201ENSMUST00000210436 275 ntBASIC11□□□□□ -0.65
Rif1Q6PR54 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC11□□□□□ -0.65
Rif1Q6PR54 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rif1Q6PR54 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rif1Q6PR54 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11□□□□□ -0.65
Rif1Q6PR54 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Gm43399-201ENSMUST00000202546 2374 ntBASIC11□□□□□ -0.65
Rif1Q6PR54 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11□□□□□ -0.65
Rif1Q6PR54 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Rif1Q6PR54 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11□□□□□ -0.65
Rif1Q6PR54 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11□□□□□ -0.65
Rif1Q6PR54 Gm25998-201ENSMUST00000175397 53 ntBASIC11□□□□□ -0.65
Rif1Q6PR54 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Mir6941-201ENSMUST00000184711 59 ntBASIC11□□□□□ -0.65
Rif1Q6PR54 Gm10774-201ENSMUST00000188689 204 ntBASIC11□□□□□ -0.65
Rif1Q6PR54 Gm44329-201ENSMUST00000197469 112 ntBASIC11□□□□□ -0.65
Rif1Q6PR54 Gm45594-201ENSMUST00000211717 241 ntBASIC11□□□□□ -0.65
Rif1Q6PR54 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rif1Q6PR54 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rif1Q6PR54 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11□□□□□ -0.65
Rif1Q6PR54 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Rif1Q6PR54 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rif1Q6PR54 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Rif1Q6PR54 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rif1Q6PR54 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Gm14058-201ENSMUST00000116082 735 ntBASIC10.99□□□□□ -0.65
Rif1Q6PR54 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Gm14234-201ENSMUST00000119539 845 ntBASIC10.99□□□□□ -0.65
Rif1Q6PR54 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.99□□□□□ -0.65
Rif1Q6PR54 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Gm26989-201ENSMUST00000182608 749 ntBASIC10.99□□□□□ -0.65
Rif1Q6PR54 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Gm44069-201ENSMUST00000204898 506 ntBASIC10.99□□□□□ -0.65
Rif1Q6PR54 Gm17812-201ENSMUST00000204935 318 ntBASIC10.99□□□□□ -0.65
Rif1Q6PR54 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Rif1Q6PR54 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.99□□□□□ -0.65
Rif1Q6PR54 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Ginm1-202ENSMUST00000065124 300 ntBASIC10.99□□□□□ -0.65
Rif1Q6PR54 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.99□□□□□ -0.65
Rif1Q6PR54 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rif1Q6PR54 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 966.7 ms