Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Gm6447-201ENSMUST00000118905 835 ntBASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Gm17837-201ENSMUST00000186435 985 ntBASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Gm9063-201ENSMUST00000223299 582 ntBASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Gm8396-201ENSMUST00000057361 823 ntBASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.86□□□□□ -0.35
Scaf4Q6PFF0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Gm13453-201ENSMUST00000118708 357 ntBASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Gm15376-201ENSMUST00000122258 783 ntBASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Gm26464-201ENSMUST00000157094 305 ntBASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scaf4Q6PFF0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms