Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup98Q6PFD9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Gm28450-201ENSMUST00000187349 638 ntBASIC15.1■□□□□ 0.01
Nup98Q6PFD9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 B9d1os-201ENSMUST00000137010 674 ntBASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Gstp-ps-201ENSMUST00000195526 631 ntBASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup98Q6PFD9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Gm24231-201ENSMUST00000104315 133 ntBASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Gm16481-201ENSMUST00000119074 1227 ntBASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Gm7003-201ENSMUST00000195089 312 ntBASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Gm44651-201ENSMUST00000207343 372 ntBASIC15.09■□□□□ 0.01
Nup98Q6PFD9 AC154252.2-201ENSMUST00000223593 767 ntBASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nup98Q6PFD9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Nup98Q6PFD9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Nup98Q6PFD9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Nup98Q6PFD9 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC15.08■□□□□ 0.01
Nup98Q6PFD9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nup98Q6PFD9 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC15.08■□□□□ 0.01
Nup98Q6PFD9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC15.08■□□□□ 0.01
Nup98Q6PFD9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC15.08■□□□□ 0.01
Nup98Q6PFD9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.08■□□□□ 0.01
Nup98Q6PFD9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nup98Q6PFD9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nup98Q6PFD9 Gm9996-201ENSMUST00000070359 913 ntBASIC15.08■□□□□ 0.01
Nup98Q6PFD9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nup98Q6PFD9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nup98Q6PFD9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.08■□□□□ 0
Nup98Q6PFD9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.08■□□□□ 0
Nup98Q6PFD9 Grk6-205ENSMUST00000224653 2976 ntBASIC15.08■□□□□ 0
Nup98Q6PFD9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nup98Q6PFD9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.08■□□□□ 0
Nup98Q6PFD9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.08■□□□□ 0
Nup98Q6PFD9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nup98Q6PFD9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nup98Q6PFD9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.08■□□□□ 0
Nup98Q6PFD9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms