Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd4Q6PDQ2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd4Q6PDQ2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chd4Q6PDQ2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd4Q6PDQ2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chd4Q6PDQ2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd4Q6PDQ2 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chd4Q6PDQ2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd4Q6PDQ2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chd4Q6PDQ2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
Chd4Q6PDQ2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chd4Q6PDQ2 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chd4Q6PDQ2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Chd4Q6PDQ2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Gm13045-201ENSMUST00000119019 712 ntBASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 H2-Q3-201ENSMUST00000172583 608 ntBASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Gm43962-201ENSMUST00000203898 190 ntBASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 CU062626.3-201ENSMUST00000225522 1411 ntBASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd4Q6PDQ2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Gm5616-201ENSMUST00000165252 384 ntBASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Gm8741-201ENSMUST00000174736 384 ntBASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Gm28882-201ENSMUST00000185504 314 ntBASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 AC154276.3-201ENSMUST00000227643 998 ntBASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd4Q6PDQ2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 AU022133-201ENSMUST00000200601 873 ntBASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Gm8285-201ENSMUST00000208293 759 ntBASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Gm17827-201ENSMUST00000211825 742 ntBASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Gm27530-201ENSMUST00000184096 98 ntBASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms