Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShbQ6PD21 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ShbQ6PD21 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.91□□□□□ -0.18
ShbQ6PD21 Mir7677-201ENSMUST00000184226 67 ntBASIC13.91□□□□□ -0.18
ShbQ6PD21 Gm10774-201ENSMUST00000188689 204 ntBASIC13.91□□□□□ -0.18
ShbQ6PD21 Gm19931-201ENSMUST00000198920 368 ntBASIC13.91□□□□□ -0.18
ShbQ6PD21 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.91□□□□□ -0.18
ShbQ6PD21 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShbQ6PD21 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.91□□□□□ -0.18
ShbQ6PD21 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ShbQ6PD21 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShbQ6PD21 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShbQ6PD21 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShbQ6PD21 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.91□□□□□ -0.18
ShbQ6PD21 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
ShbQ6PD21 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ShbQ6PD21 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShbQ6PD21 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShbQ6PD21 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShbQ6PD21 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ShbQ6PD21 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ShbQ6PD21 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ShbQ6PD21 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShbQ6PD21 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShbQ6PD21 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShbQ6PD21 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.9□□□□□ -0.18
ShbQ6PD21 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
ShbQ6PD21 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ShbQ6PD21 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.9□□□□□ -0.18
ShbQ6PD21 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ShbQ6PD21 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.9□□□□□ -0.18
ShbQ6PD21 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 Gm15573-201ENSMUST00000119487 540 ntBASIC13.9□□□□□ -0.18
ShbQ6PD21 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.9□□□□□ -0.18
ShbQ6PD21 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.9□□□□□ -0.18
ShbQ6PD21 Gm22138-201ENSMUST00000158748 128 ntBASIC13.9□□□□□ -0.18
ShbQ6PD21 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.9□□□□□ -0.18
ShbQ6PD21 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.9□□□□□ -0.18
ShbQ6PD21 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 Gm17827-201ENSMUST00000211825 742 ntBASIC13.9□□□□□ -0.18
ShbQ6PD21 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.9□□□□□ -0.18
ShbQ6PD21 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.9□□□□□ -0.18
ShbQ6PD21 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.9□□□□□ -0.18
ShbQ6PD21 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.9□□□□□ -0.18
ShbQ6PD21 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ShbQ6PD21 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.9□□□□□ -0.18
ShbQ6PD21 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShbQ6PD21 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
ShbQ6PD21 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ShbQ6PD21 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
ShbQ6PD21 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ShbQ6PD21 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
ShbQ6PD21 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
ShbQ6PD21 Gm12899-201ENSMUST00000120565 551 ntBASIC13.89□□□□□ -0.19
ShbQ6PD21 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.89□□□□□ -0.19
ShbQ6PD21 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.89□□□□□ -0.19
ShbQ6PD21 Gm43962-201ENSMUST00000203898 190 ntBASIC13.89□□□□□ -0.19
ShbQ6PD21 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.89□□□□□ -0.19
ShbQ6PD21 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.89□□□□□ -0.19
ShbQ6PD21 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.89□□□□□ -0.19
ShbQ6PD21 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.89□□□□□ -0.19
ShbQ6PD21 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.89□□□□□ -0.19
ShbQ6PD21 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.89□□□□□ -0.19
ShbQ6PD21 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ShbQ6PD21 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms