Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 AC159103.1-201ENSMUST00000228325 429 ntBASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Gm21811-201ENSMUST00000096485 930 ntBASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Gm10710-201ENSMUST00000047876 3971 ntBASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Rmrp-201ENSMUST00000157463 271 ntBASIC19.7■□□□□ 0.74
Slx4Q6P1D7 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Gm45550-201ENSMUST00000209380 946 ntBASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 AL732506.1-201ENSMUST00000226420 281 ntBASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Gm5525-201ENSMUST00000190438 1312 ntBASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Slx4Q6P1D7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Gm12196-201ENSMUST00000120954 262 ntBASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Gm1821-202ENSMUST00000227415 750 ntBASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slx4Q6P1D7 Gm21998-201ENSMUST00000117552 1308 ntBASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Gm12501-201ENSMUST00000119163 529 ntBASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Gm270-201ENSMUST00000223010 976 ntBASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Ginm1-202ENSMUST00000065124 300 ntBASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Gm10076-201ENSMUST00000073238 384 ntBASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms