Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col11a2Q64739 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Col11a2Q64739 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col11a2Q64739 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.42■□□□□ 0.06
Col11a2Q64739 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col11a2Q64739 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col11a2Q64739 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col11a2Q64739 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Col11a2Q64739 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Col11a2Q64739 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Col11a2Q64739 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col11a2Q64739 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Col11a2Q64739 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.42■□□□□ 0.06
Col11a2Q64739 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC15.42■□□□□ 0.06
Col11a2Q64739 Rn7s6-201ENSMUST00000175005 291 ntBASIC15.42■□□□□ 0.06
Col11a2Q64739 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col11a2Q64739 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col11a2Q64739 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Col11a2Q64739 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col11a2Q64739 AC154290.1-201ENSMUST00000223786 1240 ntBASIC15.42■□□□□ 0.06
Col11a2Q64739 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col11a2Q64739 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Col11a2Q64739 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col11a2Q64739 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Col11a2Q64739 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col11a2Q64739 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col11a2Q64739 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col11a2Q64739 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Col11a2Q64739 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Col11a2Q64739 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
Col11a2Q64739 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.41■□□□□ 0.06
Col11a2Q64739 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC15.41■□□□□ 0.06
Col11a2Q64739 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col11a2Q64739 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Col11a2Q64739 Mir7677-201ENSMUST00000184226 67 ntBASIC15.41■□□□□ 0.06
Col11a2Q64739 Gm6905-201ENSMUST00000205729 511 ntBASIC15.41■□□□□ 0.06
Col11a2Q64739 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC15.41■□□□□ 0.06
Col11a2Q64739 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Snora73b-201ENSMUST00000083419 205 ntBASIC15.41■□□□□ 0.06
Col11a2Q64739 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC15.41■□□□□ 0.06
Col11a2Q64739 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col11a2Q64739 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Col11a2Q64739 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Col11a2Q64739 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.41■□□□□ 0.06
Col11a2Q64739 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.41■□□□□ 0.06
Col11a2Q64739 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col11a2Q64739 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.4■□□□□ 0.06
Col11a2Q64739 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC15.4■□□□□ 0.06
Col11a2Q64739 Gm6771-201ENSMUST00000182716 1001 ntBASIC15.4■□□□□ 0.06
Col11a2Q64739 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC15.4■□□□□ 0.06
Col11a2Q64739 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.4■□□□□ 0.06
Col11a2Q64739 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.4■□□□□ 0.06
Col11a2Q64739 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.4■□□□□ 0.06
Col11a2Q64739 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.4■□□□□ 0.06
Col11a2Q64739 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col11a2Q64739 Mir874-201ENSMUST00000104769 76 ntBASIC15.4■□□□□ 0.06
Col11a2Q64739 Gm18893-201ENSMUST00000198416 943 ntBASIC15.4■□□□□ 0.06
Col11a2Q64739 Gm17831-201ENSMUST00000205579 900 ntBASIC15.4■□□□□ 0.06
Col11a2Q64739 Gm4157-201ENSMUST00000211647 679 ntBASIC15.4■□□□□ 0.06
Col11a2Q64739 CT571245.2-201ENSMUST00000218421 305 ntBASIC15.4■□□□□ 0.06
Col11a2Q64739 CT009713.8-202ENSMUST00000224732 385 ntBASIC15.4■□□□□ 0.06
Col11a2Q64739 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Gm10288-201ENSMUST00000084614 537 ntBASIC15.4■□□□□ 0.06
Col11a2Q64739 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Col11a2Q64739 Gm3765-201ENSMUST00000130985 1447 ntBASIC15.4■□□□□ 0.06
Col11a2Q64739 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col11a2Q64739 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col11a2Q64739 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col11a2Q64739 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col11a2Q64739 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col11a2Q64739 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col11a2Q64739 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms