Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Zfp248Q640N4 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.94□□□□□ -0.82
Zfp248Q640N4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.94□□□□□ -0.82
Zfp248Q640N4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.94□□□□□ -0.82
Zfp248Q640N4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.94□□□□□ -0.82
Zfp248Q640N4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Gm42612-201ENSMUST00000197986 623 ntBASIC9.94□□□□□ -0.82
Zfp248Q640N4 Gm43170-201ENSMUST00000199827 612 ntBASIC9.94□□□□□ -0.82
Zfp248Q640N4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Zfp248Q640N4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.94□□□□□ -0.82
Zfp248Q640N4 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.94□□□□□ -0.82
Zfp248Q640N4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.94□□□□□ -0.82
Zfp248Q640N4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Rn7sk-201ENSMUST00000083103 331 ntBASIC9.94□□□□□ -0.82
Zfp248Q640N4 Gm26315-201ENSMUST00000083890 321 ntBASIC9.94□□□□□ -0.82
Zfp248Q640N4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Zfp248Q640N4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC9.93□□□□□ -0.82
Zfp248Q640N4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.93□□□□□ -0.82
Zfp248Q640N4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.93□□□□□ -0.82
Zfp248Q640N4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Gm10305-201ENSMUST00000195331 2475 ntBASIC9.93□□□□□ -0.82
Zfp248Q640N4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.93□□□□□ -0.82
Zfp248Q640N4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Gm16215-201ENSMUST00000161990 637 ntBASIC9.93□□□□□ -0.82
Zfp248Q640N4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Zfp248Q640N4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.93□□□□□ -0.82
Zfp248Q640N4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms