Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Gm12585-201ENSMUST00000117307 290 ntBASIC9.44□□□□□ -0.9
Ndufa4Q62425 Mir1897-201ENSMUST00000122581 272 ntBASIC9.44□□□□□ -0.9
Ndufa4Q62425 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ndufa4Q62425 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Gm27494-201ENSMUST00000184735 189 ntBASIC9.43□□□□□ -0.9
Ndufa4Q62425 Gm10459-201ENSMUST00000202708 1155 ntBASIC9.43□□□□□ -0.9
Ndufa4Q62425 Gm18206-201ENSMUST00000207027 926 ntBASIC9.43□□□□□ -0.9
Ndufa4Q62425 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ndufa4Q62425 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.43□□□□□ -0.9
Ndufa4Q62425 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufa4Q62425 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms