Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Scn9aQ62205 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scn9aQ62205 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Scn9aQ62205 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scn9aQ62205 Gm12795-201ENSMUST00000117594 539 ntBASIC15.05■□□□□ -0
Scn9aQ62205 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Scn9aQ62205 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.05■□□□□ -0
Scn9aQ62205 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.05■□□□□ -0
Scn9aQ62205 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.05■□□□□ -0
Scn9aQ62205 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC15.05■□□□□ -0
Scn9aQ62205 Gm270-201ENSMUST00000223010 976 ntBASIC15.05■□□□□ -0
Scn9aQ62205 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC15.05■□□□□ -0
Scn9aQ62205 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Scn9aQ62205 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scn9aQ62205 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Scn9aQ62205 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Scn9aQ62205 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scn9aQ62205 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scn9aQ62205 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.05■□□□□ -0
Scn9aQ62205 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scn9aQ62205 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scn9aQ62205 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Scn9aQ62205 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Scn9aQ62205 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.04■□□□□ -0
Scn9aQ62205 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Scn9aQ62205 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC15.04■□□□□ -0
Scn9aQ62205 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.04■□□□□ -0
Scn9aQ62205 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.04■□□□□ -0
Scn9aQ62205 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC15.04■□□□□ -0
Scn9aQ62205 Gm9230-201ENSMUST00000188228 532 ntBASIC15.04■□□□□ -0
Scn9aQ62205 Gm17827-201ENSMUST00000211825 742 ntBASIC15.04■□□□□ -0
Scn9aQ62205 Gm4797-201ENSMUST00000219075 1283 ntBASIC15.04■□□□□ -0
Scn9aQ62205 Gm21811-201ENSMUST00000096485 930 ntBASIC15.04■□□□□ -0
Scn9aQ62205 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.04■□□□□ -0
Scn9aQ62205 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Scn9aQ62205 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Scn9aQ62205 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Scn9aQ62205 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Scn9aQ62205 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.04■□□□□ -0
Scn9aQ62205 Gm7851-201ENSMUST00000117574 323 ntBASIC15.04■□□□□ -0
Scn9aQ62205 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC15.04■□□□□ -0
Scn9aQ62205 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC15.04■□□□□ -0
Scn9aQ62205 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Scn9aQ62205 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.04■□□□□ -0
Scn9aQ62205 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.04■□□□□ -0
Scn9aQ62205 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC15.04■□□□□ -0
Scn9aQ62205 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Gm18893-201ENSMUST00000198416 943 ntBASIC15.04■□□□□ -0
Scn9aQ62205 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.04■□□□□ -0
Scn9aQ62205 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Scn9aQ62205 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.03■□□□□ -0
Scn9aQ62205 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.03■□□□□ -0
Scn9aQ62205 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.03■□□□□ -0
Scn9aQ62205 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.03■□□□□ -0
Scn9aQ62205 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Scn9aQ62205 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.03■□□□□ -0
Scn9aQ62205 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Scn9aQ62205 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Scn9aQ62205 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.03■□□□□ -0
Scn9aQ62205 Gm16397-201ENSMUST00000122201 494 ntBASIC15.03■□□□□ -0
Scn9aQ62205 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC15.03■□□□□ -0
Scn9aQ62205 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms