Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm37008-201ENSMUST00000195712 319 ntBASIC10.05□□□□□ -0.8
Notch3Q61982 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.05□□□□□ -0.8
Notch3Q61982 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Notch3Q61982 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.05□□□□□ -0.8
Notch3Q61982 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Notch3Q61982 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Notch3Q61982 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Notch3Q61982 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Notch3Q61982 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Notch3Q61982 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Notch3Q61982 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Notch3Q61982 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.04□□□□□ -0.8
Notch3Q61982 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
Notch3Q61982 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Notch3Q61982 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Notch3Q61982 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Notch3Q61982 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Notch3Q61982 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Notch3Q61982 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Notch3Q61982 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.04□□□□□ -0.8
Notch3Q61982 Gm6621-201ENSMUST00000193251 772 ntBASIC10.04□□□□□ -0.8
Notch3Q61982 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.04□□□□□ -0.8
Notch3Q61982 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Notch3Q61982 Itm2b-204ENSMUST00000228637 783 ntBASIC10.04□□□□□ -0.8
Notch3Q61982 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Notch3Q61982 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Notch3Q61982 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Notch3Q61982 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.04□□□□□ -0.8
Notch3Q61982 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Notch3Q61982 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Notch3Q61982 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Notch3Q61982 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Notch3Q61982 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.04□□□□□ -0.8
Notch3Q61982 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Notch3Q61982 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Notch3Q61982 Gm38266-201ENSMUST00000194931 421 ntBASIC10.04□□□□□ -0.8
Notch3Q61982 Olfr284-202ENSMUST00000206647 966 ntBASIC10.04□□□□□ -0.8
Notch3Q61982 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.04□□□□□ -0.8
Notch3Q61982 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Notch3Q61982 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch3Q61982 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.03□□□□□ -0.8
Notch3Q61982 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.03□□□□□ -0.8
Notch3Q61982 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.03□□□□□ -0.8
Notch3Q61982 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Gm38158-201ENSMUST00000194617 339 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms